Browsing by Author "Villa, Anna (36943101100)"
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Publication Immunopathological and microbial signatures of inflammatory bowel disease in partial RAG deficiency(2025) ;Castagnoli, Riccardo (56366251400) ;Pala, Francesca (55603818400) ;Subramanian, Poorani (57189631904) ;Oguz, Cihan (9133624000) ;Schwarz, Benjamin (55619438000) ;Lim, Ai Ing (57193556823) ;Burns, Andrew S. (56043569000) ;Fontana, Elena (48660891500) ;Bosticardo, Marita (6506779224) ;Corsino, Cristina (57205707588) ;Angelova, Angelina (57224817174) ;Delmonte, Ottavia M. (18433796100) ;Kenney, Heather (35083678600) ;Riley, Deanna (57984561500) ;Smith, Grace (57220082729) ;Ott de Bruin, Lisa (45161547300) ;Oikonomou, Vasileios (56428844500) ;Dos Santos Dias, Lucas (57208574479) ;Fink, Danielle (59788484800) ;Bohrnsen, Eric (57221266586) ;Kimzey, Cole D. (59482984100) ;Marseglia, Gian Luigi (26422377200) ;Alva-Lozada, Guisela (57202747551) ;Bergerson, Jenna R E (57194567900) ;Brett, Ana (55433755700) ;Brigatti, Karlla W. (6602284243) ;Dimitrova, Dimana (55901822800) ;Dutmer, Cullen M. (56928384900) ;Freeman, Alexandra F. (55628579720) ;Ale, Hanadys (57194305765) ;Holland, Steven M. (7201492425) ;Licciardi, Francesco (56045160800) ;Pasic, Srdjan (55904557400) ;Poskitt, Laura E. (57205658480) ;Potts, David E. (57920549500) ;Dasso, Joseph F. (57205109181) ;Sharapova, Svetlana O. (55450834100) ;Strauss, Kevin A. (7005726823) ;Ward, Brant R. (59790833200) ;Yilmaz, Melis (57215894272) ;Kuhns, Douglas B. (7004335679) ;Lionakis, Michail S. (6507497145) ;Daley, Stephen R. (12244627900) ;Kong, Heidi H. (24381481900) ;Segre, Julia A. (57202793924) ;Villa, Anna (36943101100) ;Pittaluga, Stefania (7006897513) ;Walter, Jolan E. (57197514533) ;Vujkovic-Cvijin, Ivan (36194330500) ;Belkaid, Yasmine (6701726927)Notarangelo, Luigi D. (34768650200)Partial RAG deficiency (pRD) can manifest with systemic and tissue-specific immune dysregulation, with inflammatory bowel disease (IBD) in 15% of the patients. We aimed at identifying the immunopathological and microbial signatures associated with IBD in patients with pRD and in a mouse model of pRD (Rag1w/w) with spontaneous development of colitis. pRD patients with IBD and Rag1w/w mice showed a systemic and colonic Th1/Th17 inflammatory signature. Restriction of fecal microbial diversity, abundance of pathogenic bacteria, and depletion of microbial species producing short-chain fatty acid were observed, which were associated with impaired induction of lamina propria peripheral Treg cells in Rag1w/w mice. The use of vedolizumab in Rag1w/w mice and of ustekinumab in a pRD patient were ineffective. Antibiotics ameliorated gut inflammation in Rag1w/w mice, but only bone marrow transplantation (BMT) rescued the immunopathological and microbial signatures. Our findings shed new light in the pathophysiology of gut inflammation in pRD and establish a curative role for BMT to resolve the disease phenotype. © 2025 Castagnoli et al. - Some of the metrics are blocked by yourconsent settings
Publication Immunopathological and microbial signatures of inflammatory bowel disease in partial RAG deficiency(2025) ;Castagnoli, Riccardo (56366251400) ;Pala, Francesca (55603818400) ;Subramanian, Poorani (57189631904) ;Oguz, Cihan (9133624000) ;Schwarz, Benjamin (55619438000) ;Lim, Ai Ing (57193556823) ;Burns, Andrew S. (56043569000) ;Fontana, Elena (48660891500) ;Bosticardo, Marita (6506779224) ;Corsino, Cristina (57205707588) ;Angelova, Angelina (57224817174) ;Delmonte, Ottavia M. (18433796100) ;Kenney, Heather (35083678600) ;Riley, Deanna (57984561500) ;Smith, Grace (57220082729) ;Ott de Bruin, Lisa (45161547300) ;Oikonomou, Vasileios (56428844500) ;Dos Santos Dias, Lucas (57208574479) ;Fink, Danielle (59788484800) ;Bohrnsen, Eric (57221266586) ;Kimzey, Cole D. (59482984100) ;Marseglia, Gian Luigi (26422377200) ;Alva-Lozada, Guisela (57202747551) ;Bergerson, Jenna R E (57194567900) ;Brett, Ana (55433755700) ;Brigatti, Karlla W. (6602284243) ;Dimitrova, Dimana (55901822800) ;Dutmer, Cullen M. (56928384900) ;Freeman, Alexandra F. (55628579720) ;Ale, Hanadys (57194305765) ;Holland, Steven M. (7201492425) ;Licciardi, Francesco (56045160800) ;Pasic, Srdjan (55904557400) ;Poskitt, Laura E. (57205658480) ;Potts, David E. (57920549500) ;Dasso, Joseph F. (57205109181) ;Sharapova, Svetlana O. (55450834100) ;Strauss, Kevin A. (7005726823) ;Ward, Brant R. (59790833200) ;Yilmaz, Melis (57215894272) ;Kuhns, Douglas B. (7004335679) ;Lionakis, Michail S. (6507497145) ;Daley, Stephen R. (12244627900) ;Kong, Heidi H. (24381481900) ;Segre, Julia A. (57202793924) ;Villa, Anna (36943101100) ;Pittaluga, Stefania (7006897513) ;Walter, Jolan E. (57197514533) ;Vujkovic-Cvijin, Ivan (36194330500) ;Belkaid, Yasmine (6701726927)Notarangelo, Luigi D. (34768650200)Partial RAG deficiency (pRD) can manifest with systemic and tissue-specific immune dysregulation, with inflammatory bowel disease (IBD) in 15% of the patients. We aimed at identifying the immunopathological and microbial signatures associated with IBD in patients with pRD and in a mouse model of pRD (Rag1w/w) with spontaneous development of colitis. pRD patients with IBD and Rag1w/w mice showed a systemic and colonic Th1/Th17 inflammatory signature. Restriction of fecal microbial diversity, abundance of pathogenic bacteria, and depletion of microbial species producing short-chain fatty acid were observed, which were associated with impaired induction of lamina propria peripheral Treg cells in Rag1w/w mice. The use of vedolizumab in Rag1w/w mice and of ustekinumab in a pRD patient were ineffective. Antibiotics ameliorated gut inflammation in Rag1w/w mice, but only bone marrow transplantation (BMT) rescued the immunopathological and microbial signatures. Our findings shed new light in the pathophysiology of gut inflammation in pRD and establish a curative role for BMT to resolve the disease phenotype. © 2025 Castagnoli et al. - Some of the metrics are blocked by yourconsent settings
Publication Multiomics dissection of human RAG deficiency reveals distinctive patterns of immune dysregulation but a common inflammatory signature(2025) ;Bosticardo, Marita (6506779224) ;Dobbs, Kerry (55778402700) ;Delmonte, Ottavia M. (18433796100) ;Martins, Andrew J. (36111605200) ;Pala, Francesca (55603818400) ;Kawai, Tomoki (59815676900) ;Kenney, Heather (35083678600) ;Magro, Gloria (57278544000) ;Rosen, Lindsey B. (55200672600) ;Yamazaki, Yasuhiro (55319485100) ;Yu, Hsin-Hui (12902763700) ;Calzoni, Enrica (57192254708) ;Lee, Yu Nee (8948130600) ;Liu, Can (58366844900) ;Stoddard, Jennifer (55769135300) ;Niemela, Julie (7006539187) ;Fink, Danielle (35760842400) ;Castagnoli, Riccardo (56366251400) ;Ramba, Meredith (58741151700) ;Cheng, Aristine (42461295300) ;Riley, Deanna (57984561500) ;Oikonomou, Vasileios (56428844500) ;Shaw, Elana (57219615351) ;Belaid, Brahim (57215696617) ;Keles, Sevgi (10838870800) ;Al-Herz, Waleed (59525962100) ;Cancrini, Caterina (6602683164) ;Cifaldi, Cristina (57192257356) ;Baris, Safa (24467329000) ;Sharapova, Svetlana (55450834100) ;Schuetz, Catharina (20436954100) ;Gennery, Andrew R. (57202369449) ;Freeman, Alexandra F. (55628579720) ;Somech, Raz (55911907500) ;Choo, Sharon (36910593100) ;Giliani, Silvia C. (35309934800) ;Güngör, Tayfun (57196175438) ;Drozdov, Daniel (55626387400) ;Meyts, Isabelle (57216768155) ;Moshous, Despina (6603167051) ;Neven, Benedicte (6508178857) ;Abraham, Roshini S. (57382706400) ;El-Marsafy, Aisha (55892471500) ;Kanariou, Maria (6603545923) ;King, Alejandra (23004881300) ;Licciardi, Francesco (56045160800) ;Cruz-Muñoz, Mario E. (7801534331) ;Palma, Paolo (35519174000) ;Poli, Cecilia (57191883631) ;Adeli, Mehdi (35202934200) ;Algeri, Mattia (57192338055) ;Alroqi, Fayhan J. (56845667100) ;Bastard, Paul (57219618314) ;Bergerson, Jenna R.E. (57194567900) ;Booth, Claire (7203045714) ;Brett, Ana (55433755700) ;Burns, Siobhan O. (57205954118) ;Butte, Manish J. (6603481179) ;Padem, Nurcicek (37007616500) ;de la Morena, M. Teresa (57209481291) ;Dbaibo, Ghassan (7003602816) ;de Ravin, Suk See (12785673200) ;Dimitrova, Dimana (55901822800) ;Djidjik, Reda (23391861800) ;Dorna, Mayra B. (6506289737) ;Dutmer, Cullen M. (56928384900) ;Elfeky, Reem (55645792800) ;Facchetti, Fabio (7006730085) ;Fuleihan, Ramsay L. (7003440477) ;Geha, Raif S. (57216596064) ;Gonzalez-Granado, Luis I. (24450099000) ;Haljasmägi, Liis (57215215584) ;Ale, Hanadys (57194305765) ;Hayward, Anthony (57193850812) ;Hifanova, Anna M. (59525413800) ;Ip, Winnie (55601754300) ;Kaplan, Blanka (7402531691) ;Kapoor, Neena (7102419904) ;Karakoc-Aydiner, Elif (26658977800) ;Kärner, Jaanika (56236125000) ;Keller, Michael D. (7401805736) ;Dávila Saldaña, Blachy J. (55589439000) ;Kiykim, Ayça (55537270400) ;Kuijpers, Taco W. (57216577133) ;Kuznetsova, Elena E. (59525413900) ;Latysheva, Elena A. (6506117493) ;Leiding, Jennifer W. (54972365800) ;Locatelli, Franco (7202821559) ;Alva-Lozada, Guisela (57202747551) ;McCusker, Christine (57207779909) ;Celmeli, Fatih (25957914800) ;Morsheimer, Megan (22035254300) ;Ozen, Ahmet (8309372700) ;Parvaneh, Nima (11339080300) ;Pasic, Srdjan (55904557400) ;Plebani, Alessandro (57212728631) ;Preece, Kahn (56040720600) ;Prockop, Susan (6602212121) ;Sakovich, Inga S. (57200916072) ;Starkova, Elena E. (59525309700) ;Torgerson, Troy (6603182459) ;Verbsky, James (6602830264) ;Walter, Jolan E. (57197514533) ;Ward, Brant (8730703900) ;Wisner, Elizabeth L. (57204914926) ;Draper, Deborah (56217845900) ;Myint-Hpu, Katherine (57221500504) ;Truong, Pooi M. (59525205100) ;Lionakis, Michail S. (6507497145) ;Similuk, Morgan B. (56912268600) ;Walkiewicz, Magdalena A. (57194843274) ;Klion, Amy (7003277368) ;Holland, Steven M. (7201492425) ;Oguz, Cihan (9133624000) ;Bogunovic, Dusan (15836948100) ;Kisand, Kai (57226234589) ;Su, Helen C. (7401459381) ;Tsang, John S. (7102483297) ;Kuhns, Douglas (7004335679) ;Villa, Anna (36943101100) ;Rosenzweig, Sergio D. (7006603551) ;Pittaluga, Stefania (7006897513)Notarangelo, Luigi D. (34768650200)Human recombination-activating gene (RAG) deficiency can manifest with distinct clinical and immunological phenotypes. By applying a multiomics approach to a large group of RAG-mutated patients, we aimed at characterizing the immunopathology associated with each phenotype. Although defective T and B cell development is common to all phenotypes, patients with hypomorphic RAG variants can generate T and B cells with signatures of immune dysregulation and produce autoantibodies to a broad range of self-antigens, including type I interferons. T helper 2 (TH2) cell skewing and a prominent inflammatory signature characterize Omenn syndrome, whereas more hypomorphic forms of RAG deficiency are associated with a type 1 immune profile both in blood and tissues. We used cellular indexing of transcriptomes and epitopes by sequencing (CITE-seq) analysis to define the cell lineage–specific contribution to the immunopathology of the distinct RAG phenotypes. These insights may help improve the diagnosis and clinical management of the various forms of the disease. Copyright © 2025 The Authors, some rights reserved. - Some of the metrics are blocked by yourconsent settings
Publication Multiomics dissection of human RAG deficiency reveals distinctive patterns of immune dysregulation but a common inflammatory signature(2025) ;Bosticardo, Marita (6506779224) ;Dobbs, Kerry (55778402700) ;Delmonte, Ottavia M. (18433796100) ;Martins, Andrew J. (36111605200) ;Pala, Francesca (55603818400) ;Kawai, Tomoki (59815676900) ;Kenney, Heather (35083678600) ;Magro, Gloria (57278544000) ;Rosen, Lindsey B. (55200672600) ;Yamazaki, Yasuhiro (55319485100) ;Yu, Hsin-Hui (12902763700) ;Calzoni, Enrica (57192254708) ;Lee, Yu Nee (8948130600) ;Liu, Can (58366844900) ;Stoddard, Jennifer (55769135300) ;Niemela, Julie (7006539187) ;Fink, Danielle (35760842400) ;Castagnoli, Riccardo (56366251400) ;Ramba, Meredith (58741151700) ;Cheng, Aristine (42461295300) ;Riley, Deanna (57984561500) ;Oikonomou, Vasileios (56428844500) ;Shaw, Elana (57219615351) ;Belaid, Brahim (57215696617) ;Keles, Sevgi (10838870800) ;Al-Herz, Waleed (59525962100) ;Cancrini, Caterina (6602683164) ;Cifaldi, Cristina (57192257356) ;Baris, Safa (24467329000) ;Sharapova, Svetlana (55450834100) ;Schuetz, Catharina (20436954100) ;Gennery, Andrew R. (57202369449) ;Freeman, Alexandra F. (55628579720) ;Somech, Raz (55911907500) ;Choo, Sharon (36910593100) ;Giliani, Silvia C. (35309934800) ;Güngör, Tayfun (57196175438) ;Drozdov, Daniel (55626387400) ;Meyts, Isabelle (57216768155) ;Moshous, Despina (6603167051) ;Neven, Benedicte (6508178857) ;Abraham, Roshini S. (57382706400) ;El-Marsafy, Aisha (55892471500) ;Kanariou, Maria (6603545923) ;King, Alejandra (23004881300) ;Licciardi, Francesco (56045160800) ;Cruz-Muñoz, Mario E. (7801534331) ;Palma, Paolo (35519174000) ;Poli, Cecilia (57191883631) ;Adeli, Mehdi (35202934200) ;Algeri, Mattia (57192338055) ;Alroqi, Fayhan J. (56845667100) ;Bastard, Paul (57219618314) ;Bergerson, Jenna R.E. (57194567900) ;Booth, Claire (7203045714) ;Brett, Ana (55433755700) ;Burns, Siobhan O. (57205954118) ;Butte, Manish J. (6603481179) ;Padem, Nurcicek (37007616500) ;de la Morena, M. Teresa (6602571559) ;Dbaibo, Ghassan (7003602816) ;de Ravin, Suk See (12785673200) ;Dimitrova, Dimana (55901822800) ;Djidjik, Reda (23391861800) ;Dorna, Mayra B. (6506289737) ;Dutmer, Cullen M. (56928384900) ;Elfeky, Reem (55645792800) ;Facchetti, Fabio (7006730085) ;Fuleihan, Ramsay L. (7003440477) ;Geha, Raif S. (57216596064) ;Gonzalez-Granado, Luis I. (24450099000) ;Haljasmägi, Liis (57215215584) ;Ale, Hanadys (57194305765) ;Hayward, Anthony (57193850812) ;Hifanova, Anna M. (59525413800) ;Ip, Winnie (55601754300) ;Kaplan, Blanka (7402531691) ;Kapoor, Neena (7102419904) ;Karakoc-Aydiner, Elif (26658977800) ;Kärner, Jaanika (56236125000) ;Keller, Michael D. (7401805736) ;Dávila Saldaña, Blachy J. (55589439000) ;Kiykim, Ayça (55537270400) ;Kuijpers, Taco W. (57216577133) ;Kuznetsova, Elena E. (59525413900) ;Latysheva, Elena A. (6506117493) ;Leiding, Jennifer W. (54972365800) ;Locatelli, Franco (7202821559) ;Alva-Lozada, Guisela (57202747551) ;McCusker, Christine (57207779909) ;Celmeli, Fatih (25957914800) ;Morsheimer, Megan (22035254300) ;Ozen, Ahmet (8309372700) ;Parvaneh, Nima (11339080300) ;Pasic, Srdjan (55904557400) ;Plebani, Alessandro (57212728631) ;Preece, Kahn (56040720600) ;Prockop, Susan (6602212121) ;Sakovich, Inga S. (57200916072) ;Starkova, Elena E. (59525309700) ;Torgerson, Troy (6603182459) ;Verbsky, James (6602830264) ;Walter, Jolan E. (57197514533) ;Ward, Brant (8730703900) ;Wisner, Elizabeth L. (57204914926) ;Draper, Deborah (56217845900) ;Myint-Hpu, Katherine (57221500504) ;Truong, Pooi M. (59525205100) ;Lionakis, Michail S. (6507497145) ;Similuk, Morgan B. (56912268600) ;Walkiewicz, Magdalena A. (57194843274) ;Klion, Amy (7003277368) ;Holland, Steven M. (7201492425) ;Oguz, Cihan (9133624000) ;Bogunovic, Dusan (15836948100) ;Kisand, Kai (57226234589) ;Su, Helen C. (7401459381) ;Tsang, John S. (7102483297) ;Kuhns, Douglas (7004335679) ;Villa, Anna (36943101100) ;Rosenzweig, Sergio D. (7006603551) ;Pittaluga, Stefania (7006897513)Notarangelo, Luigi D. (34768650200)Human recombination-activating gene (RAG) deficiency can manifest with distinct clinical and immunological phenotypes. By applying a multiomics approach to a large group of RAG-mutated patients, we aimed at characterizing the immunopathology associated with each phenotype. Although defective T and B cell development is common to all phenotypes, patients with hypomorphic RAG variants can generate T and B cells with signatures of immune dysregulation and produce autoantibodies to a broad range of self-antigens, including type I interferons. T helper 2 (TH2) cell skewing and a prominent inflammatory signature characterize Omenn syndrome, whereas more hypomorphic forms of RAG deficiency are associated with a type 1 immune profile both in blood and tissues. We used cellular indexing of transcriptomes and epitopes by sequencing (CITE-seq) analysis to define the cell lineage–specific contribution to the immunopathology of the distinct RAG phenotypes. These insights may help improve the diagnosis and clinical management of the various forms of the disease. Copyright © 2025 The Authors, some rights reserved. - Some of the metrics are blocked by yourconsent settings
Publication Severe combined immunodeficiency in Serbia and Montenegro between years 1986 and 2010: A single-center experience(2014) ;Pasic, Srdjan (55904557400) ;Vujic, Dragana (16647611700) ;Veljković, Dobrila (6701554227) ;Slavkovic, Bojana (6507636002) ;Mostarica-Stojkovic, Marija (6701741422) ;Minic, Predrag (6603400160) ;Minic, Aleksandra (6603962122) ;Ristic, Goran (26534852200) ;Giliani, Silvia (35309934800) ;Villa, Anna (36943101100) ;Sobacchi, Cristina (6603202793) ;Lilić, Desa (7004838046)Abinun, Mario (55880862200)Severe combined immunodeficiency (SCID), including the 'variant' Omenn syndrome (OS), represent a heterogeneous group of monogenic disorders characterized by defect in differentiation of T- and/or B lymphocytes and susceptibility to infections since birth. In the period of 25 years, between January 1986 and December 2010, a total of 21 patients (15 SCID, 6 OS) were diagnosed in Mother & Child Health Institute of Serbia, a tertiary-care teaching University hospital and a national referral center for patients affected with primary immunodeficiency (PID). The diagnoses were based on anamnestic data, clinical findings, and immunological and genetic analysis. The median age at the onset of the first infection was the 2nd month of life. Seven (33 %) patients had positive family history for SCID. Out of five male infants with T-B+NK- SCID phenotype, mutation analysis revealed interleukin-2 (common) gamma-chain receptor (IL2RG) mutations in 3 with positive X-linked family history, and Janus-kinase (JAK)-3 gene defects in the other two. Six patients had T-B-NK+ SCID phenotype and further 6 features of OS, 11 of which had recombinase-activating gene (RAG1or RAG2) and 1 Artemis gene mutations. One child with T+B+NK+ SCID phenotype as well had proven RAG mutation. One child each with T-B+NK+ SCID phenotype, CD8 lymphopenia and unknown phenotype remained without known underlying genetic defect. Of the eight patients who underwent hematopoetic stem cell transplant (HSCT) 5 survived, the other 13 died between 2 days and 12 months after diagnosis was made. Early diagnosis of SCID, before onset of severe infections, offers possibility for HSCT and cure. Education of primary-care pediatricians, in particular including awareness of the risk of using live vaccines and non-irradiated blood products, should improve prognosis of SCID in our setting. © 2014 Springer Science+Business Media New York. - Some of the metrics are blocked by yourconsent settings
Publication Severe combined immunodeficiency in Serbia and Montenegro between years 1986 and 2010: A single-center experience(2014) ;Pasic, Srdjan (55904557400) ;Vujic, Dragana (16647611700) ;Veljković, Dobrila (6701554227) ;Slavkovic, Bojana (6507636002) ;Mostarica-Stojkovic, Marija (6701741422) ;Minic, Predrag (6603400160) ;Minic, Aleksandra (6603962122) ;Ristic, Goran (26534852200) ;Giliani, Silvia (35309934800) ;Villa, Anna (36943101100) ;Sobacchi, Cristina (6603202793) ;Lilić, Desa (7004838046)Abinun, Mario (55880862200)Severe combined immunodeficiency (SCID), including the 'variant' Omenn syndrome (OS), represent a heterogeneous group of monogenic disorders characterized by defect in differentiation of T- and/or B lymphocytes and susceptibility to infections since birth. In the period of 25 years, between January 1986 and December 2010, a total of 21 patients (15 SCID, 6 OS) were diagnosed in Mother & Child Health Institute of Serbia, a tertiary-care teaching University hospital and a national referral center for patients affected with primary immunodeficiency (PID). The diagnoses were based on anamnestic data, clinical findings, and immunological and genetic analysis. The median age at the onset of the first infection was the 2nd month of life. Seven (33 %) patients had positive family history for SCID. Out of five male infants with T-B+NK- SCID phenotype, mutation analysis revealed interleukin-2 (common) gamma-chain receptor (IL2RG) mutations in 3 with positive X-linked family history, and Janus-kinase (JAK)-3 gene defects in the other two. Six patients had T-B-NK+ SCID phenotype and further 6 features of OS, 11 of which had recombinase-activating gene (RAG1or RAG2) and 1 Artemis gene mutations. One child with T+B+NK+ SCID phenotype as well had proven RAG mutation. One child each with T-B+NK+ SCID phenotype, CD8 lymphopenia and unknown phenotype remained without known underlying genetic defect. Of the eight patients who underwent hematopoetic stem cell transplant (HSCT) 5 survived, the other 13 died between 2 days and 12 months after diagnosis was made. Early diagnosis of SCID, before onset of severe infections, offers possibility for HSCT and cure. Education of primary-care pediatricians, in particular including awareness of the risk of using live vaccines and non-irradiated blood products, should improve prognosis of SCID in our setting. © 2014 Springer Science+Business Media New York.
