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Browsing by Author "Delmonte, Ottavia M. (18433796100)"

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    Publication
    Immunopathological and microbial signatures of inflammatory bowel disease in partial RAG deficiency
    (2025)
    Castagnoli, Riccardo (56366251400)
    ;
    Pala, Francesca (55603818400)
    ;
    Subramanian, Poorani (57189631904)
    ;
    Oguz, Cihan (9133624000)
    ;
    Schwarz, Benjamin (55619438000)
    ;
    Lim, Ai Ing (57193556823)
    ;
    Burns, Andrew S. (56043569000)
    ;
    Fontana, Elena (48660891500)
    ;
    Bosticardo, Marita (6506779224)
    ;
    Corsino, Cristina (57205707588)
    ;
    Angelova, Angelina (57224817174)
    ;
    Delmonte, Ottavia M. (18433796100)
    ;
    Kenney, Heather (35083678600)
    ;
    Riley, Deanna (57984561500)
    ;
    Smith, Grace (57220082729)
    ;
    Ott de Bruin, Lisa (45161547300)
    ;
    Oikonomou, Vasileios (56428844500)
    ;
    Dos Santos Dias, Lucas (57208574479)
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    Fink, Danielle (59788484800)
    ;
    Bohrnsen, Eric (57221266586)
    ;
    Kimzey, Cole D. (59482984100)
    ;
    Marseglia, Gian Luigi (26422377200)
    ;
    Alva-Lozada, Guisela (57202747551)
    ;
    Bergerson, Jenna R E (57194567900)
    ;
    Brett, Ana (55433755700)
    ;
    Brigatti, Karlla W. (6602284243)
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    Dimitrova, Dimana (55901822800)
    ;
    Dutmer, Cullen M. (56928384900)
    ;
    Freeman, Alexandra F. (55628579720)
    ;
    Ale, Hanadys (57194305765)
    ;
    Holland, Steven M. (7201492425)
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    Licciardi, Francesco (56045160800)
    ;
    Pasic, Srdjan (55904557400)
    ;
    Poskitt, Laura E. (57205658480)
    ;
    Potts, David E. (57920549500)
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    Dasso, Joseph F. (57205109181)
    ;
    Sharapova, Svetlana O. (55450834100)
    ;
    Strauss, Kevin A. (7005726823)
    ;
    Ward, Brant R. (59790833200)
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    Yilmaz, Melis (57215894272)
    ;
    Kuhns, Douglas B. (7004335679)
    ;
    Lionakis, Michail S. (6507497145)
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    Daley, Stephen R. (12244627900)
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    Kong, Heidi H. (24381481900)
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    Segre, Julia A. (57202793924)
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    Villa, Anna (36943101100)
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    Pittaluga, Stefania (7006897513)
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    Walter, Jolan E. (57197514533)
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    Vujkovic-Cvijin, Ivan (36194330500)
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    Belkaid, Yasmine (6701726927)
    ;
    Notarangelo, Luigi D. (34768650200)
    Partial RAG deficiency (pRD) can manifest with systemic and tissue-specific immune dysregulation, with inflammatory bowel disease (IBD) in 15% of the patients. We aimed at identifying the immunopathological and microbial signatures associated with IBD in patients with pRD and in a mouse model of pRD (Rag1w/w) with spontaneous development of colitis. pRD patients with IBD and Rag1w/w mice showed a systemic and colonic Th1/Th17 inflammatory signature. Restriction of fecal microbial diversity, abundance of pathogenic bacteria, and depletion of microbial species producing short-chain fatty acid were observed, which were associated with impaired induction of lamina propria peripheral Treg cells in Rag1w/w mice. The use of vedolizumab in Rag1w/w mice and of ustekinumab in a pRD patient were ineffective. Antibiotics ameliorated gut inflammation in Rag1w/w mice, but only bone marrow transplantation (BMT) rescued the immunopathological and microbial signatures. Our findings shed new light in the pathophysiology of gut inflammation in pRD and establish a curative role for BMT to resolve the disease phenotype. © 2025 Castagnoli et al.
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    Publication
    Immunopathological and microbial signatures of inflammatory bowel disease in partial RAG deficiency
    (2025)
    Castagnoli, Riccardo (56366251400)
    ;
    Pala, Francesca (55603818400)
    ;
    Subramanian, Poorani (57189631904)
    ;
    Oguz, Cihan (9133624000)
    ;
    Schwarz, Benjamin (55619438000)
    ;
    Lim, Ai Ing (57193556823)
    ;
    Burns, Andrew S. (56043569000)
    ;
    Fontana, Elena (48660891500)
    ;
    Bosticardo, Marita (6506779224)
    ;
    Corsino, Cristina (57205707588)
    ;
    Angelova, Angelina (57224817174)
    ;
    Delmonte, Ottavia M. (18433796100)
    ;
    Kenney, Heather (35083678600)
    ;
    Riley, Deanna (57984561500)
    ;
    Smith, Grace (57220082729)
    ;
    Ott de Bruin, Lisa (45161547300)
    ;
    Oikonomou, Vasileios (56428844500)
    ;
    Dos Santos Dias, Lucas (57208574479)
    ;
    Fink, Danielle (59788484800)
    ;
    Bohrnsen, Eric (57221266586)
    ;
    Kimzey, Cole D. (59482984100)
    ;
    Marseglia, Gian Luigi (26422377200)
    ;
    Alva-Lozada, Guisela (57202747551)
    ;
    Bergerson, Jenna R E (57194567900)
    ;
    Brett, Ana (55433755700)
    ;
    Brigatti, Karlla W. (6602284243)
    ;
    Dimitrova, Dimana (55901822800)
    ;
    Dutmer, Cullen M. (56928384900)
    ;
    Freeman, Alexandra F. (55628579720)
    ;
    Ale, Hanadys (57194305765)
    ;
    Holland, Steven M. (7201492425)
    ;
    Licciardi, Francesco (56045160800)
    ;
    Pasic, Srdjan (55904557400)
    ;
    Poskitt, Laura E. (57205658480)
    ;
    Potts, David E. (57920549500)
    ;
    Dasso, Joseph F. (57205109181)
    ;
    Sharapova, Svetlana O. (55450834100)
    ;
    Strauss, Kevin A. (7005726823)
    ;
    Ward, Brant R. (59790833200)
    ;
    Yilmaz, Melis (57215894272)
    ;
    Kuhns, Douglas B. (7004335679)
    ;
    Lionakis, Michail S. (6507497145)
    ;
    Daley, Stephen R. (12244627900)
    ;
    Kong, Heidi H. (24381481900)
    ;
    Segre, Julia A. (57202793924)
    ;
    Villa, Anna (36943101100)
    ;
    Pittaluga, Stefania (7006897513)
    ;
    Walter, Jolan E. (57197514533)
    ;
    Vujkovic-Cvijin, Ivan (36194330500)
    ;
    Belkaid, Yasmine (6701726927)
    ;
    Notarangelo, Luigi D. (34768650200)
    Partial RAG deficiency (pRD) can manifest with systemic and tissue-specific immune dysregulation, with inflammatory bowel disease (IBD) in 15% of the patients. We aimed at identifying the immunopathological and microbial signatures associated with IBD in patients with pRD and in a mouse model of pRD (Rag1w/w) with spontaneous development of colitis. pRD patients with IBD and Rag1w/w mice showed a systemic and colonic Th1/Th17 inflammatory signature. Restriction of fecal microbial diversity, abundance of pathogenic bacteria, and depletion of microbial species producing short-chain fatty acid were observed, which were associated with impaired induction of lamina propria peripheral Treg cells in Rag1w/w mice. The use of vedolizumab in Rag1w/w mice and of ustekinumab in a pRD patient were ineffective. Antibiotics ameliorated gut inflammation in Rag1w/w mice, but only bone marrow transplantation (BMT) rescued the immunopathological and microbial signatures. Our findings shed new light in the pathophysiology of gut inflammation in pRD and establish a curative role for BMT to resolve the disease phenotype. © 2025 Castagnoli et al.
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    Publication
    Multiomics dissection of human RAG deficiency reveals distinctive patterns of immune dysregulation but a common inflammatory signature
    (2025)
    Bosticardo, Marita (6506779224)
    ;
    Dobbs, Kerry (55778402700)
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    Delmonte, Ottavia M. (18433796100)
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    Martins, Andrew J. (36111605200)
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    Pala, Francesca (55603818400)
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    Kawai, Tomoki (59815676900)
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    Kenney, Heather (35083678600)
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    Magro, Gloria (57278544000)
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    Rosen, Lindsey B. (55200672600)
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    Yamazaki, Yasuhiro (55319485100)
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    Yu, Hsin-Hui (12902763700)
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    Calzoni, Enrica (57192254708)
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    Lee, Yu Nee (8948130600)
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    Liu, Can (58366844900)
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    Stoddard, Jennifer (55769135300)
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    Niemela, Julie (7006539187)
    ;
    Fink, Danielle (35760842400)
    ;
    Castagnoli, Riccardo (56366251400)
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    Ramba, Meredith (58741151700)
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    Cheng, Aristine (42461295300)
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    Riley, Deanna (57984561500)
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    Oikonomou, Vasileios (56428844500)
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    Shaw, Elana (57219615351)
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    Belaid, Brahim (57215696617)
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    Keles, Sevgi (10838870800)
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    Al-Herz, Waleed (59525962100)
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    Cancrini, Caterina (6602683164)
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    Cifaldi, Cristina (57192257356)
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    Baris, Safa (24467329000)
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    Sharapova, Svetlana (55450834100)
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    Schuetz, Catharina (20436954100)
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    Gennery, Andrew R. (57202369449)
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    Freeman, Alexandra F. (55628579720)
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    Somech, Raz (55911907500)
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    Choo, Sharon (36910593100)
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    Giliani, Silvia C. (35309934800)
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    Güngör, Tayfun (57196175438)
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    Drozdov, Daniel (55626387400)
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    Meyts, Isabelle (57216768155)
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    Moshous, Despina (6603167051)
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    Neven, Benedicte (6508178857)
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    Abraham, Roshini S. (57382706400)
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    El-Marsafy, Aisha (55892471500)
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    Kanariou, Maria (6603545923)
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    King, Alejandra (23004881300)
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    Licciardi, Francesco (56045160800)
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    Cruz-Muñoz, Mario E. (7801534331)
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    Palma, Paolo (35519174000)
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    Poli, Cecilia (57191883631)
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    Adeli, Mehdi (35202934200)
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    Algeri, Mattia (57192338055)
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    Alroqi, Fayhan J. (56845667100)
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    Bastard, Paul (57219618314)
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    Bergerson, Jenna R.E. (57194567900)
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    Booth, Claire (7203045714)
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    Brett, Ana (55433755700)
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    Burns, Siobhan O. (57205954118)
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    Butte, Manish J. (6603481179)
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    Padem, Nurcicek (37007616500)
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    de la Morena, M. Teresa (57209481291)
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    Dbaibo, Ghassan (7003602816)
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    de Ravin, Suk See (12785673200)
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    Dimitrova, Dimana (55901822800)
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    Djidjik, Reda (23391861800)
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    Dorna, Mayra B. (6506289737)
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    Dutmer, Cullen M. (56928384900)
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    Elfeky, Reem (55645792800)
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    Facchetti, Fabio (7006730085)
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    Fuleihan, Ramsay L. (7003440477)
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    Geha, Raif S. (57216596064)
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    Gonzalez-Granado, Luis I. (24450099000)
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    Haljasmägi, Liis (57215215584)
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    Ale, Hanadys (57194305765)
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    Hayward, Anthony (57193850812)
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    Hifanova, Anna M. (59525413800)
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    Ip, Winnie (55601754300)
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    Kaplan, Blanka (7402531691)
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    Kapoor, Neena (7102419904)
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    Karakoc-Aydiner, Elif (26658977800)
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    Kärner, Jaanika (56236125000)
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    Keller, Michael D. (7401805736)
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    Dávila Saldaña, Blachy J. (55589439000)
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    Kiykim, Ayça (55537270400)
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    Kuijpers, Taco W. (57216577133)
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    Kuznetsova, Elena E. (59525413900)
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    Latysheva, Elena A. (6506117493)
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    Leiding, Jennifer W. (54972365800)
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    Locatelli, Franco (7202821559)
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    Alva-Lozada, Guisela (57202747551)
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    McCusker, Christine (57207779909)
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    Celmeli, Fatih (25957914800)
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    Morsheimer, Megan (22035254300)
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    Ozen, Ahmet (8309372700)
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    Parvaneh, Nima (11339080300)
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    Pasic, Srdjan (55904557400)
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    Plebani, Alessandro (57212728631)
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    Preece, Kahn (56040720600)
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    Prockop, Susan (6602212121)
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    Sakovich, Inga S. (57200916072)
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    Starkova, Elena E. (59525309700)
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    Torgerson, Troy (6603182459)
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    Verbsky, James (6602830264)
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    Walter, Jolan E. (57197514533)
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    Ward, Brant (8730703900)
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    Wisner, Elizabeth L. (57204914926)
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    Draper, Deborah (56217845900)
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    Myint-Hpu, Katherine (57221500504)
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    Truong, Pooi M. (59525205100)
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    Lionakis, Michail S. (6507497145)
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    Similuk, Morgan B. (56912268600)
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    Walkiewicz, Magdalena A. (57194843274)
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    Klion, Amy (7003277368)
    ;
    Holland, Steven M. (7201492425)
    ;
    Oguz, Cihan (9133624000)
    ;
    Bogunovic, Dusan (15836948100)
    ;
    Kisand, Kai (57226234589)
    ;
    Su, Helen C. (7401459381)
    ;
    Tsang, John S. (7102483297)
    ;
    Kuhns, Douglas (7004335679)
    ;
    Villa, Anna (36943101100)
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    Rosenzweig, Sergio D. (7006603551)
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    Pittaluga, Stefania (7006897513)
    ;
    Notarangelo, Luigi D. (34768650200)
    Human recombination-activating gene (RAG) deficiency can manifest with distinct clinical and immunological phenotypes. By applying a multiomics approach to a large group of RAG-mutated patients, we aimed at characterizing the immunopathology associated with each phenotype. Although defective T and B cell development is common to all phenotypes, patients with hypomorphic RAG variants can generate T and B cells with signatures of immune dysregulation and produce autoantibodies to a broad range of self-antigens, including type I interferons. T helper 2 (TH2) cell skewing and a prominent inflammatory signature characterize Omenn syndrome, whereas more hypomorphic forms of RAG deficiency are associated with a type 1 immune profile both in blood and tissues. We used cellular indexing of transcriptomes and epitopes by sequencing (CITE-seq) analysis to define the cell lineage–specific contribution to the immunopathology of the distinct RAG phenotypes. These insights may help improve the diagnosis and clinical management of the various forms of the disease. Copyright © 2025 The Authors, some rights reserved.
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    Publication
    Multiomics dissection of human RAG deficiency reveals distinctive patterns of immune dysregulation but a common inflammatory signature
    (2025)
    Bosticardo, Marita (6506779224)
    ;
    Dobbs, Kerry (55778402700)
    ;
    Delmonte, Ottavia M. (18433796100)
    ;
    Martins, Andrew J. (36111605200)
    ;
    Pala, Francesca (55603818400)
    ;
    Kawai, Tomoki (59815676900)
    ;
    Kenney, Heather (35083678600)
    ;
    Magro, Gloria (57278544000)
    ;
    Rosen, Lindsey B. (55200672600)
    ;
    Yamazaki, Yasuhiro (55319485100)
    ;
    Yu, Hsin-Hui (12902763700)
    ;
    Calzoni, Enrica (57192254708)
    ;
    Lee, Yu Nee (8948130600)
    ;
    Liu, Can (58366844900)
    ;
    Stoddard, Jennifer (55769135300)
    ;
    Niemela, Julie (7006539187)
    ;
    Fink, Danielle (35760842400)
    ;
    Castagnoli, Riccardo (56366251400)
    ;
    Ramba, Meredith (58741151700)
    ;
    Cheng, Aristine (42461295300)
    ;
    Riley, Deanna (57984561500)
    ;
    Oikonomou, Vasileios (56428844500)
    ;
    Shaw, Elana (57219615351)
    ;
    Belaid, Brahim (57215696617)
    ;
    Keles, Sevgi (10838870800)
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    Al-Herz, Waleed (59525962100)
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    Cancrini, Caterina (6602683164)
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    Cifaldi, Cristina (57192257356)
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    Baris, Safa (24467329000)
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    Sharapova, Svetlana (55450834100)
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    Schuetz, Catharina (20436954100)
    ;
    Gennery, Andrew R. (57202369449)
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    Freeman, Alexandra F. (55628579720)
    ;
    Somech, Raz (55911907500)
    ;
    Choo, Sharon (36910593100)
    ;
    Giliani, Silvia C. (35309934800)
    ;
    Güngör, Tayfun (57196175438)
    ;
    Drozdov, Daniel (55626387400)
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    Meyts, Isabelle (57216768155)
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    Moshous, Despina (6603167051)
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    Neven, Benedicte (6508178857)
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    Abraham, Roshini S. (57382706400)
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    El-Marsafy, Aisha (55892471500)
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    Kanariou, Maria (6603545923)
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    King, Alejandra (23004881300)
    ;
    Licciardi, Francesco (56045160800)
    ;
    Cruz-Muñoz, Mario E. (7801534331)
    ;
    Palma, Paolo (35519174000)
    ;
    Poli, Cecilia (57191883631)
    ;
    Adeli, Mehdi (35202934200)
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    Algeri, Mattia (57192338055)
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    Alroqi, Fayhan J. (56845667100)
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    Bastard, Paul (57219618314)
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    Bergerson, Jenna R.E. (57194567900)
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    Booth, Claire (7203045714)
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    Brett, Ana (55433755700)
    ;
    Burns, Siobhan O. (57205954118)
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    Butte, Manish J. (6603481179)
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    Padem, Nurcicek (37007616500)
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    de la Morena, M. Teresa (6602571559)
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    Dbaibo, Ghassan (7003602816)
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    de Ravin, Suk See (12785673200)
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    Dimitrova, Dimana (55901822800)
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    Djidjik, Reda (23391861800)
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    Dorna, Mayra B. (6506289737)
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    Dutmer, Cullen M. (56928384900)
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    Elfeky, Reem (55645792800)
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    Facchetti, Fabio (7006730085)
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    Fuleihan, Ramsay L. (7003440477)
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    Geha, Raif S. (57216596064)
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    Gonzalez-Granado, Luis I. (24450099000)
    ;
    Haljasmägi, Liis (57215215584)
    ;
    Ale, Hanadys (57194305765)
    ;
    Hayward, Anthony (57193850812)
    ;
    Hifanova, Anna M. (59525413800)
    ;
    Ip, Winnie (55601754300)
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    Kaplan, Blanka (7402531691)
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    Kapoor, Neena (7102419904)
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    Karakoc-Aydiner, Elif (26658977800)
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    Kärner, Jaanika (56236125000)
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    Keller, Michael D. (7401805736)
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    Dávila Saldaña, Blachy J. (55589439000)
    ;
    Kiykim, Ayça (55537270400)
    ;
    Kuijpers, Taco W. (57216577133)
    ;
    Kuznetsova, Elena E. (59525413900)
    ;
    Latysheva, Elena A. (6506117493)
    ;
    Leiding, Jennifer W. (54972365800)
    ;
    Locatelli, Franco (7202821559)
    ;
    Alva-Lozada, Guisela (57202747551)
    ;
    McCusker, Christine (57207779909)
    ;
    Celmeli, Fatih (25957914800)
    ;
    Morsheimer, Megan (22035254300)
    ;
    Ozen, Ahmet (8309372700)
    ;
    Parvaneh, Nima (11339080300)
    ;
    Pasic, Srdjan (55904557400)
    ;
    Plebani, Alessandro (57212728631)
    ;
    Preece, Kahn (56040720600)
    ;
    Prockop, Susan (6602212121)
    ;
    Sakovich, Inga S. (57200916072)
    ;
    Starkova, Elena E. (59525309700)
    ;
    Torgerson, Troy (6603182459)
    ;
    Verbsky, James (6602830264)
    ;
    Walter, Jolan E. (57197514533)
    ;
    Ward, Brant (8730703900)
    ;
    Wisner, Elizabeth L. (57204914926)
    ;
    Draper, Deborah (56217845900)
    ;
    Myint-Hpu, Katherine (57221500504)
    ;
    Truong, Pooi M. (59525205100)
    ;
    Lionakis, Michail S. (6507497145)
    ;
    Similuk, Morgan B. (56912268600)
    ;
    Walkiewicz, Magdalena A. (57194843274)
    ;
    Klion, Amy (7003277368)
    ;
    Holland, Steven M. (7201492425)
    ;
    Oguz, Cihan (9133624000)
    ;
    Bogunovic, Dusan (15836948100)
    ;
    Kisand, Kai (57226234589)
    ;
    Su, Helen C. (7401459381)
    ;
    Tsang, John S. (7102483297)
    ;
    Kuhns, Douglas (7004335679)
    ;
    Villa, Anna (36943101100)
    ;
    Rosenzweig, Sergio D. (7006603551)
    ;
    Pittaluga, Stefania (7006897513)
    ;
    Notarangelo, Luigi D. (34768650200)
    Human recombination-activating gene (RAG) deficiency can manifest with distinct clinical and immunological phenotypes. By applying a multiomics approach to a large group of RAG-mutated patients, we aimed at characterizing the immunopathology associated with each phenotype. Although defective T and B cell development is common to all phenotypes, patients with hypomorphic RAG variants can generate T and B cells with signatures of immune dysregulation and produce autoantibodies to a broad range of self-antigens, including type I interferons. T helper 2 (TH2) cell skewing and a prominent inflammatory signature characterize Omenn syndrome, whereas more hypomorphic forms of RAG deficiency are associated with a type 1 immune profile both in blood and tissues. We used cellular indexing of transcriptomes and epitopes by sequencing (CITE-seq) analysis to define the cell lineage–specific contribution to the immunopathology of the distinct RAG phenotypes. These insights may help improve the diagnosis and clinical management of the various forms of the disease. Copyright © 2025 The Authors, some rights reserved.

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